oblique_mc

Monte Carlo in Single Layer Biological Tissue
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README.md (1374B)


      1 # Oblique Incidence Monte Carlo
      2 
      3 This code simulates an obliquely incident photon source (pencil
      4 beam) on a scattering medium. It can simulate one incident point
      5 source or many. The program has been tested on and is known to
      6 work on Linux and Windows 10.
      7 
      8 ![Diffuse Reflectance](example.png)
      9 
     10 ## Configuration
     11 
     12 Configuration is changed by copying `config.def.h` to `config.h`
     13 and editing it. This configuration is then baked into the compiled
     14 binary. This helps the compiler optimize the binary for a faster
     15 runtime and keeps the types of configuration variables clear.
     16 
     17 ## Building
     18 
     19 After copying over and editing `config.h` the program can be
     20 compiled by running:
     21 
     22 ```
     23 ./build.sh
     24 ```
     25 
     26 On Linux the only dependency is libc, on Windows winpthreads is
     27 also required.
     28 
     29 ## Running
     30 
     31 The compiled program can be run as:
     32 
     33 ```
     34 ./mc output_filename_prefix
     35 ```
     36 
     37 Currently directories in `output_filename_prefix` are not checked
     38 for existence prior to running so the program will fail to save
     39 the output if you don't ensure this yourself.
     40 
     41 ## Citations
     42 
     43 If you intend on using this as a basis for any published works a
     44 citation, while not required, would be appreciated 🙂!
     45 
     46 ```bibtex
     47 @software{rnpnroblique2024,
     48 	title     = {Oblique Incidence Monte Carlo},
     49 	author    = {Palamar, Randy},
     50 	year      = 2024,
     51 	month     = 4,
     52 	url       = {https://github.com/rnpnr/oblique_mc}
     53 }
     54 ```